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CLP1 protein (Yarrowia lipolytica) - STRING interaction network
"CLP1" - YALI0F31031p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
CLP1YALI0F31031p; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (450 aa)    
Predicted Functional Partners:
YTH1
YALI0D14982p; Component of the cleavage factor I (CF I) involved in pre-mRNA 3’-end processing (193 aa)
     
  0.980
XP_501829.2
YALI0C14476p (541 aa)
       
  0.969
RNA14
YALI0D18612p; Component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (806 aa)
     
  0.938
CFT1
YALI0E03982p; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation-dependent pre-mRNA 3’-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3’-end formation (By similarity) (1269 aa)
     
  0.933
XP_503723.1
YALI0E09174p (253 aa)
     
  0.932
YSH1
YALI0F03817p; Component of the cleavage factor I (CF I) involved in pre-mRNA 3’-end processing (827 aa)
     
  0.928
XP_502172.1
YALI0C23232p (799 aa)
     
  0.866
XP_503115.1
YALI0D21530p (526 aa)
     
      0.861
PFS2
YALI0A17424p; Required for 3’-end cleavage and polyadenylation of pre- mRNAs. Also involved in chromosome segregation where it has a role in chromosome attachment to the mitotic spindle (By similarity) (532 aa)
     
  0.849
XP_500029.1
YALI0A13101p (867 aa)
     
    0.848
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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