STRINGSTRING
XP_506093.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_506093.1" - YALI0F31383p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_506093.1YALI0F31383p (419 aa)    
Predicted Functional Partners:
XP_500653.1
YALI0B08756p (714 aa)
     
  0.988
PNO1
YALI0E01122p; Required for small ribosomal subunit (SSU) synthesis. Has a role in the processing of early nucleolar and late cytoplasmic pre-RNA species (By similarity) (258 aa)
     
  0.978
XP_501431.1
YALI0C04213p (423 aa)
     
  0.975
XP_505471.1
YALI0F15829p (450 aa)
     
  0.971
XP_506048.1
90S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (359 aa)
     
  0.945
XP_503695.1
YALI0E08448p (491 aa)
     
  0.937
DIM1
YALI0E00770p; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3’-end of 18S rRNA in the 40S particle (317 aa)
     
 
  0.925
XP_505155.1
YALI0F08305p (514 aa)
     
  0.923
IMP4
YALI0D23859p; Component of the U3 small nucleolar ribonucleoprotein. Required for the early cleavages at sites A0, A1 and A2 during 18S ribosomal pre-RNA processing (By similarity) (283 aa)
     
 
  0.909
XP_505410.1
YALI0F14377p (468 aa)
     
  0.862
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (8%) [HD]