STRINGSTRING
XP_506096.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_506096.1" - YALI0F31449p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_506096.1YALI0F31449p (1137 aa)    
Predicted Functional Partners:
XP_500585.1
YALI0B06875p (1607 aa)
     
 
  0.902
XP_500104.1
YALI0A15708p (518 aa)
       
 
  0.769
NOP58
YALI0B00946p; Required for pre-18S rRNA processing. May bind microtubules (By similarity) (515 aa)
     
 
  0.682
HAS1
YALI0E01782p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (605 aa)
     
 
  0.682
XP_501306.1
YALI0C00913p (912 aa)
     
        0.680
ERB1
YALI0E26389p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (820 aa)
     
   
  0.679
UTP10
YALI0E29506p; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity) (1635 aa)
     
   
  0.660
XP_504582.1
YALI0E30217p (1567 aa)
     
   
  0.653
XP_504667.1
YALI0E32043p (780 aa)
     
      0.639
XP_505388.1
YALI0F13783p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1628 aa)
     
        0.636
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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