STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAL1ATP-dependent RNA helicase FAL1; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (By similarity). Belongs to the DEAD box helicase family. DDX48/FAL1 subfamily. (399 aa)    
Predicted Functional Partners:
CWC22
Pre-mRNA-splicing factor CWC22; Involved in pre-mRNA splicing.
    
 0.997
Q6BKQ3_DEBHA
DEHA2F20064p.
   
 
 0.984
B5RU49_DEBHA
DEHA2E21340p.
   
 0.976
B5RTB7_DEBHA
DEHA2C14300p.
   
 0.974
Q6BKV8_DEBHA
DEHA2F18810p.
   
 0.972
B5RUM4_DEBHA
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 
 0.968
Q6BNK2_DEBHA
DEHA2E21032p.
    
 0.968
Q6BZ26_DEBHA
DEHA2A05104p.
    
 0.968
Q6BLB5_DEBHA
DEHA2F14850p.
   
 0.965
Q6BWF3_DEBHA
DEHA2B11792p.
   
 0.963
Your Current Organism:
Debaryomyces hansenii
NCBI taxonomy Id: 284592
Other names: D. hansenii CBS767, Debaryomyces hansenii CBS767
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