STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS521S rRNA pseudouridine(2819) synthase; Pseudouridylate synthase responsible for the pseudouridine- 2819 formation in mitochondrial 21S rRNA. May modulate the efficiency or the fidelity of the mitochondrial translation machinery. (339 aa)    
Predicted Functional Partners:
Q6BUA8_DEBHA
DEHA2C12342p.
    
 
 0.929
Q6BPN6_DEBHA
DEHA2E12144p.
  
 
 0.857
W0TYR2_DEBHA
DEHA2C04312p.
  
  
 0.856
Q6BID3_DEBHA
DEHA2G11748p.
  
 
 0.851
Q6BQK0_DEBHA
DEHA2E04598p.
   
   0.668
B5RTL9_DEBHA
DEHA2D18546p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.667
Q6BVK0_DEBHA
DEHA2C02046p.
   
   0.632
Q6BXN5_DEBHA
DEHA2B01562p.
   
 
 0.616
MRPL4
54S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL29 family.
    
 
 0.614
B5RT64_DEBHA
DEHA2C02970p.
   
 
 0.607
Your Current Organism:
Debaryomyces hansenii
NCBI taxonomy Id: 284592
Other names: D. hansenii CBS767, Debaryomyces hansenii CBS767
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