STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY22270.1PFAM: glycoside hydrolase family 28; KEGG: sus:Acid_7773 glycoside hydrolase, family 28; Belongs to the glycosyl hydrolase 28 family. (456 aa)    
Predicted Functional Partners:
EDY22010.1
PFAM: lipolytic protein G-D-S-L family; KEGG: rba:RB3639 hypothetical protein.
 
  0.985
EDY21919.1
PFAM: lipolytic protein G-D-S-L family; KEGG: rba:RB3639 hypothetical protein.
 
  0.983
EDY22265.1
PFAM: Pectinesterase; KEGG: sde:Sde_3447 pectin methylesterase-like.
  
 0.957
uxaC
PFAM: Glucuronate isomerase; KEGG: sus:Acid_5330 glucuronate isomerase.
 
  
 0.905
EDY22269.1
PFAM: major facilitator superfamily MFS_1; KEGG: xac:XAC4255 hexuranate transporter.
 
     0.875
EDY20956.1
Hypothetical protein; KEGG: rba:RB5312 pectate lyase.
 
  
 0.848
EDY17758.1
Hypothetical protein; KEGG: rba:RB5312 pectate lyase.
 
  
 0.848
EDY21119.1
PFAM: Pectinesterase; Ig family protein; Immunoglobulin I-set domain protein; Immunoglobulin V-set domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: chu:CHU_0938 CHU large protein; uncharacterized.
 
  
 0.846
EDY17438.1
PFAM: protein of unknown function DUF303 acetylesterase putative; glycoside hydrolase family 2 sugar binding; KEGG: bth:BT_4091 sialic acid-specific 9-O-acetylesterase.
 
 
  0.825
EDY21671.1
PFAM: protein of unknown function DUF303 acetylesterase putative; glycoside hydrolase family 2 sugar binding; KEGG: bfr:BF3493 sialic acid-specific 9-O-acetylesterase.
 
 
  0.820
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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