STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18684.1PFAM: oxidoreductase domain protein; KEGG: rba:RB6858 hypothetical oxidoreductase. (338 aa)    
Predicted Functional Partners:
EDY21599.1
KEGG: rca:Rcas_3850 hypothetical protein.
  
     0.772
EDY18702.1
KEGG: rba:RB7871 hypothetical protein-signal peptide and transmembrane prediction.
  
     0.772
EDY18094.1
KEGG: sth:STH1938 hypothetical protein.
  
     0.771
EDY16126.1
KEGG: rba:RB7871 hypothetical protein-signal peptide and transmembrane prediction.
  
     0.770
EDY20339.1
KEGG: rba:RB12544 hypothetical protein.
  
     0.769
EDY19100.1
KEGG: rba:RB3006 probable sialidase.
  
     0.769
EDY17818.1
KEGG: rba:RB3324 hypothetical protein-signal peptide and transmembrane prediction.
  
     0.766
EDY20338.1
KEGG: sth:STH1938 hypothetical protein.
  
     0.764
EDY16807.1
KEGG: rba:RB3324 hypothetical protein-signal peptide and transmembrane prediction.
  
     0.764
EDY20639.1
KEGG: rba:RB5300 hypothetical protein-signal peptide and transmembrane prediction.
  
     0.762
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.