STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN15086.1TIGRFAM: penicillin-binding protein, 1A family; KEGG: mar:MAE_39090 penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase. (817 aa)    
Predicted Functional Partners:
ADN13529.1
KEGG: ava:Ava_2356 penicillin-binding protein 1C; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein.
  
  
 
0.923
ADN16120.1
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: cyh:Cyan8802_3270 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin.
     
 0.905
ADN15334.1
KEGG: cyh:Cyan8802_0626 hypothetical protein.
   
 
 0.821
ADN15079.1
TIGRFAM: penicillin-binding protein 2; KEGG: cyh:Cyan8802_0568 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
 
 
 0.695
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.670
ADN13938.1
PFAM: cell cycle protein; KEGG: cyh:Cyan8802_3349 cell cycle protein; Belongs to the SEDS family.
  
 
 
 0.653
ADN12693.1
Hypothetical protein; KEGG: mmu:100046485 similar to gamma-aminobutyric acid A receptor, epsilon.
   
 
 0.650
ADN13391.1
PFAM: Peptidase M23; KEGG: cyh:Cyan8802_1579 peptidase M23.
  
     0.621
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
 
 
 0.621
ADN13966.1
Peptidase M23; KEGG: cyh:Cyan8802_0826 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
     0.617
Your Current Organism:
Gloeothece verrucosa
NCBI taxonomy Id: 497965
Other names: Cyanothece sp. PCC 7822, G. verrucosa PCC 7822, Gloeothece verrucosa PCC 7822
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