STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_0883Putative membrane protein. (302 aa)    
Predicted Functional Partners:
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
       0.773
CJA_0882
Uncharacterised protein family (UPF0093) superfamily; Identified by match to protein family HMM PF03653.
       0.773
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; Identified by match to protein family HMM PF00202; match to protein family HMM TIGR00713.
       0.682
CJA_0884
Voltage-gated chloride channel; Identified by match to protein family HMM PF00571; match to protein family HMM PF00654.
  
  
 0.623
CJA_3167
Conserved hypothetical protein; Identified by match to protein family HMM PF05594.
  
     0.574
kefB
Glutathione-regulated potassium-efflux system protein; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.528
CJA_0606
Hypothetical protein; Identified by Glimmer3; putative.
  
     0.479
CJA_2037
Hypothetical protein; Identified by Glimmer3; putative.
  
     0.455
tre37A
Trehalase, putative, tre37A; Identified by match to protein family HMM PF00515; match to protein family HMM PF01204.
  
     0.434
CJA_3100
Conserved hypothetical protein.
 
     0.421
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.