STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_2324Putative ABC transporter, substrate binding protein. (367 aa)    
Predicted Functional Partners:
CJA_2323
AtsB; Identified by match to protein family HMM PF00528.
 
 
 0.994
atsB
AtsB; Identified by match to protein family HMM PF00528.
 
 
 0.993
msuE
FMN reductase; Identified by match to protein family HMM PF03358.
 
 
  0.973
CJA_2343
AtsC; Identified by match to protein family HMM PF00005.
 
 
 0.961
CJA_2335
Putative alkanesulfonate monooxygenase.
 
 
 0.922
CJA_2266
Alkanesulfonate monooxygenase (FMNH2-dependentaliphatic sulfonate monooxygenase).
 
 
 0.921
CJA_2322
Alkanesulfonate monooxygenase; Identified by match to protein family HMM PF00296.
 
 
 0.911
CJA_2336
Conserved hypothetical protein.
 
 
 0.910
CJA_2271
Putative sulfonate monooxygenase; Identified by match to protein family HMM PF00296.
 
 
 0.894
CJA_2257
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.827
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.