STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_2333Putative tonB-dependent receptor protein; Identified by match to protein family HMM PF00593. (774 aa)    
Predicted Functional Partners:
CJA_2298
TonB-dependent receptor protein; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR01783.
  
  
 0.741
CJA_2295
TonB-dependent receptor protein; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR01783.
  
  
 0.739
CJA_2267
Putative TonB dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR03304.
  
  
 0.717
CJA_0560
Outer membrane ferric siderophore receptor; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR01783.
  
  
 0.705
CJA_2301
Ferric-pseudobactin 358 receptor precursor; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR01783; match to protein family HMM TIGR03304.
  
  
 0.702
CJA_1298
Ferripyoverdine receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF05594; match to protein family HMM TIGR01783.
  
  
 0.690
CJA_2292
TonB-dependent receptor protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07660; match to protein family HMM TIGR01783; match to protein family HMM TIGR03304.
  
  
 0.690
CJA_1306
TonB-dependent receptor; Identified by match to protein family HMM PF00593.
  
   
 0.688
CJA_1868
TonB-dependent receptor protein; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR01783; match to protein family HMM TIGR03304.
  
  
 0.687
CJA_0475
Putative tonB2 protein; Identified by match to protein family HMM TIGR01352.
 
 
 0.674
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.