STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
axe2BAcetyl xylan esterase, putative, axe2B. (367 aa)    
Predicted Functional Partners:
cel5D
Cellulase, putative, cel5D; Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.877
CJA_2890
Hypothetical protein; Identified by Glimmer3; putative.
       0.773
cel5F
Cellulase, putative, cel5F; Identified by match to protein family HMM PF00041; match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.771
cel5E
Cellulase, putative, cel5E; Identified by match to protein family HMM PF00150; match to protein family HMM PF00553; match to protein family HMM PF02013.
 
   
 0.753
CJA_0040
Pectin methylesterase, putative, ce8; Identified by match to protein family HMM PF00041.
  
 
 0.734
cel5C
Cellulase, putative, cel5C; Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
   
 0.715
katG1
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
       0.705
unk1
Conserved domain protein; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
  
     0.703
man26B
Endo-1, 4-beta mannanase, man26B; Identified by match to protein family HMM PF02013; match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.679
cel9C
Cellulase, putative, cel9C; Identified by similarity to GB:CAD61242.1; match to protein family HMM PF00759; match to protein family HMM PF02927.
  
 
 0.662
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.