STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_0633Type i restriction modification DNA specificity domain. (538 aa)    
Predicted Functional Partners:
HM1_0632
Type i restriction-modification system, m subunit.
 
 0.999
HM1_0631
Type i restriction-modification system, r subunit.
 
 
 0.983
HM1_3075
N-6 DNA methylase.
  
 
 0.964
hsdR
Type i site-specific deoxyribonuclease, hsdr family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.864
HM1_0634
Conserved hypothetical protein.
 
     0.847
HM1_0630
Conserved hypothetical protein.
       0.670
HM1_0635
Hypothetical protein.
       0.592
HM1_0544
Conserved hypothetical protein.
 
    0.517
atpF
ATP synthase f0, b subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
 
 0.489
HM1_0628
Conserved hypothetical protein.
     
 0.420
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.