STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_3144Geranylgeranylglyceryl phosphate synthase, putative; PcrB family protein; GGGP synthase; possible member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid meta. (227 aa)    
Predicted Functional Partners:
HM1_2000
Conserved hypothetical protein, putative membrane protein.
  
     0.774
HM1_1309
Acetyltransferase; May contain bacterial transferase hexapeptide (three repeats).
 
   
 0.679
HM1_1277
Dynamin family protein.
  
     0.571
pcrA
ATP-dependent DNA helicase pcra.
  
  
 0.494
HM1_3143
Conserved domain protein.
       0.494
sdhC
Succinate dehydrogenase (cytochrome b558 subunit).
  
     0.490
HM1_0238
Conserved hypothetical protein.
  
     0.482
HM1_0756
Conserved hypothetical protein.
  
     0.472
acsA
Acetyl-coenzyme a synthetase.
  
     0.452
HM1_3145
Hypothetical protein.
       0.447
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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