STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g12120Pc16g12120 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1075 aa)    
Predicted Functional Partners:
Pc22g02510
Pc22g02510 protein.
  
 0.990
Pc21g02050
Pc21g02050 protein.
   
 0.976
Pc16g02040
Pc16g02040 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.974
Pc13g02680
Pc13g02680 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.968
Pc21g02360
Pc21g02360 protein.
  
 0.962
Pc12g09250
Lysine--tRNA ligase.
  
 0.953
Pc16g07630
Pc16g07630 protein.
  
 0.927
Pc16g08240
Pc16g08240 protein.
  
 0.927
Pc21g15760
Pc21g15760 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.927
Pc21g13710
Pc21g13710 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
0.911
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.