Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pc13g04320 | Pc13g06540 | B6H288 | B6H3F4 | Pc13g04320 protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.997 |
Pc13g04320 | Pc16g07740 | B6H288 | B6H7V8 | Pc13g04320 protein. | Pc16g07740 protein. | 0.996 |
Pc13g04320 | Pc16g12370 | B6H288 | B6HAC8 | Pc13g04320 protein. | Pc16g12370 protein. | 0.996 |
Pc13g04320 | Pc18g01520 | B6H288 | B6HCF2 | Pc13g04320 protein. | Pc18g01520 protein. | 0.993 |
Pc13g04320 | Pc20g09050 | B6H288 | B6HF08 | Pc13g04320 protein. | Pc20g09050 protein; Belongs to the protein kinase superfamily. | 0.996 |
Pc13g04320 | Pc21g06450 | B6H288 | B6HJB0 | Pc13g04320 protein. | Pc21g06450 protein. | 0.996 |
Pc13g04320 | Pc21g16090 | B6H288 | B6HKK9 | Pc13g04320 protein. | Pc21g16090 protein. | 0.997 |
Pc13g04320 | Pc22g04800 | B6H288 | B6HTW4 | Pc13g04320 protein. | Pc22g04800 protein. | 0.997 |
Pc13g04320 | Pc22g11160 | B6H288 | B6HPX4 | Pc13g04320 protein. | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.997 |
Pc13g04320 | Pc22g14760 | B6H288 | B6HVB3 | Pc13g04320 protein. | Pc22g14760 protein; Belongs to the cyclin family. | 0.995 |
Pc13g06540 | Pc13g04320 | B6H3F4 | B6H288 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Pc13g04320 protein. | 0.997 |
Pc13g06540 | Pc16g07740 | B6H3F4 | B6H7V8 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Pc16g07740 protein. | 0.997 |
Pc13g06540 | Pc16g12370 | B6H3F4 | B6HAC8 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Pc16g12370 protein. | 0.998 |
Pc13g06540 | Pc18g01520 | B6H3F4 | B6HCF2 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Pc18g01520 protein. | 0.984 |
Pc13g06540 | Pc20g09050 | B6H3F4 | B6HF08 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Pc20g09050 protein; Belongs to the protein kinase superfamily. | 0.950 |
Pc13g06540 | Pc21g06450 | B6H3F4 | B6HJB0 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Pc21g06450 protein. | 0.999 |
Pc13g06540 | Pc21g16090 | B6H3F4 | B6HKK9 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Pc21g16090 protein. | 0.998 |
Pc13g06540 | Pc22g04800 | B6H3F4 | B6HTW4 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Pc22g04800 protein. | 0.999 |
Pc13g06540 | Pc22g11160 | B6H3F4 | B6HPX4 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.999 |
Pc13g06540 | Pc22g14760 | B6H3F4 | B6HVB3 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Pc22g14760 protein; Belongs to the cyclin family. | 0.983 |
page 1 of 6