STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g00410Pc22g00410 protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)    
Predicted Functional Partners:
Pc20g12060
E3 ubiquitin protein ligase.
    
 0.997
Pc21g19030
Pc21g19030 protein.
    
 0.996
Pc21g02440
Pc21g02440 protein; Belongs to the ubiquitin-activating E1 family.
   
 0.976
Pc16g02300
Pc16g02300 protein.
    
 0.965
Pc22g13280
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.955
Pc12g08650
Pc12g08650 protein.
    
 0.910
Pc13g09510
Pc13g09510 protein.
    
 0.908
Pc22g16800
Pc22g16800 protein.
    
 0.908
Pc22g05220
Pc22g05220 protein.
   
 0.906
Pc13g11890
Pc13g11890 protein.
    
 0.896
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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