STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g14080Pc22g14080 protein; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)    
Predicted Functional Partners:
Pc20g09900
Pc20g09900 protein.
    
 
 0.966
Pc22g00500
Pc22g00500 protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 
0.957
Pc12g03330
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
    
 
 0.953
Pc21g02440
Pc21g02440 protein; Belongs to the ubiquitin-activating E1 family.
    
 0.950
Pc22g20590
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
   0.946
Pc13g05810
Pc13g05810 protein.
    
0.908
Pc15g00690
Pc15g00690 protein.
    
 
 0.905
Pc13g03990
Pc13g03990 protein.
    
 
 0.844
Pc13g11890
Pc13g11890 protein.
    
 0.769
Pc22g12390
Pc22g12390 protein.
    
 0.769
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.