STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc21g07170DNA ligase. (990 aa)    
Predicted Functional Partners:
Pc22g15510
Pc22g15510 protein.
  
 0.997
Pc18g01820
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
   
 0.996
Pc21g15220
Pc21g15220 protein.
  
0.977
Pc16g09210
Pc16g09210 protein.
   
 0.862
Pc22g19370
Pc22g19370 protein.
  
 0.853
Pc12g15620
Pc12g15620 protein.
    
 0.843
Pc22g20500
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.843
Pc13g03710
Pc13g03710 protein.
  
 0.806
Pc21g08430
Pc21g08430 protein.
    
 0.798
Pc16g09710
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.787
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.