STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE46505.12-dehydro-3-deoxygalactonokinase. (306 aa)    
Predicted Functional Partners:
SFE46546.1
2-dehydro-3-deoxyphosphogalactonate aldolase.
 
  
 0.987
SFE46581.1
Galactonate dehydratase.
 
 
 0.982
SFE46663.1
L-arabinonolactonase.
 
     0.925
SFE46618.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.914
SFE46465.1
DNA-binding transcriptional regulator, FadR family.
 
  
 0.859
SFE45825.1
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.786
SFF44987.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.740
SFD99025.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
  0.739
SFE46701.1
MFS transporter, SP family, galactose:H+ symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
     0.634
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
  0.614
Your Current Organism:
Dyella marensis
NCBI taxonomy Id: 500610
Other names: D. marensis, Dyella marensis Lee and Lee 2009, JCM 14959, KCTC 22144, strain CS5-B2
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