STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_0190KEGG: ade:Adeh_3797 hypothetical protein. (597 aa)    
Predicted Functional Partners:
Hoch_0191
Hypothetical protein; KEGG: GG18769 gene product from transcript GG18769- RA.
       0.780
Hoch_0187
PFAM: Phosphoglycerate mutase; KEGG: sdn:Sden_2105 phosphoglycerate mutase.
       0.773
Hoch_0188
Hypothetical protein.
       0.773
Hoch_0189
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ppd:Ppro_0779 radical SAM domain-containing protein.
       0.773
Hoch_0192
KEGG: mxa:MXAN_1429 response regulator receiver domain/DnaJ domain-containing protein.
       0.770
Hoch_0194
PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mxa:MXAN_2898 ATP-dependent metalloprotease FtsH; Belongs to the AAA ATPase family.
       0.760
Hoch_0193
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mxa:MXAN_7011 hypothetical protein.
       0.752
Hoch_0195
Hypothetical protein; KEGG: acp:A2cp1_4033 para-aminobenzoate synthase, subunit I.
       0.701
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.