STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_0733KEGG: hypothetical protein. (1523 aa)    
Predicted Functional Partners:
Hoch_0734
Hypothetical protein.
       0.773
Hoch_5768
KEGG: ade:Adeh_0450 trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase family 20; trehalose- phosphatase.
   
  
 0.654
Hoch_0252
TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: scl:sce6184 type 4 fimbrial biogenesis protein PilQ.
   
 
 0.579
Hoch_3242
PFAM: 3D domain protein; KEGG: scl:sce0854 hypothetical protein.
   
  
 0.579
Hoch_4717
PFAM: 3D domain protein; KEGG: scl:sce0854 hypothetical protein.
   
  
 0.579
Hoch_3661
TIGRFAM: conserved hypothetical protein; PFAM: conserved hypothetical protein; KEGG: noc:Noc_1873 phage tail region protein.
  
   0.578
Hoch_0735
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce6317 protein kinase.
   
   0.562
Hoch_0666
KEGG: mxa:MXAN_1840 hypothetical protein.
  
 
 0.457
Hoch_0856
KEGG: mxa:MXAN_1840 hypothetical protein.
  
 
 0.457
Hoch_1546
Hypothetical protein; KEGG: gem:GM21_3652 baseplate J family protein.
  
 
 0.457
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.