STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_5872Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide repeat; KEGG: mxa:MXAN_1077 sensory box histidine kinase. (717 aa)    
Predicted Functional Partners:
Hoch_2076
GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: bja:bll2599 two-component hybrid sensor and regulator.
  
 
 0.898
Hoch_2262
PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gem:GM21_0975 response regulator receiver sensor signal transduction histidine kinase.
 
 
 0.878
Hoch_6548
PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2712 response regulator receiver sensor signal transduction histidine kinase.
 
 
 0.873
Hoch_2075
PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: bxe:Bxe_B1311 PAS/PAC sensor hybrid histidine kinase.
 
 
 0.846
Hoch_6238
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: bba:Bd0584 two component sensor histidine kinase.
 
 
 0.845
Hoch_6593
KEGG: ade:Adeh_3529 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
 
 
 0.844
Hoch_5056
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pin:Ping_0978 response regulator receiver modulated diguanylate cyclase.
 
 
 0.836
Hoch_0280
PFAM: response regulator receiver; SMART: response regulator receiver; GGDEF domain containing protein; KEGG: pin:Ping_0978 response regulator receiver modulated diguanylate cyclase.
 
 
 0.834
Hoch_4952
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: scl:sce3649 hypothetical protein.
 
 
 0.829
Hoch_5999
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afw:Anae109_3956 response regulator receiver protein.
 
 
 0.828
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.