STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_6785Hypothetical protein. (137 aa)    
Predicted Functional Partners:
Hoch_6783
PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver; KEGG: mxa:MXAN_4144 response regulator FrzZ.
       0.773
Hoch_6784
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: acp:A2cp1_2771 CheW protein.
       0.773
Hoch_6786
PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: mxa:MXAN_4141 frizzy aggregation protein FrzCD.
       0.773
Hoch_6787
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: response regulator receiver; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: mxa:MXAN_5147 sensor histidine kinase/response regulator CheA3.
       0.752
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
       0.752
Hoch_6789
MCP methyltransferase, CheR-type; KEGG: afw:Anae109_0466 protein-glutamate O- methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; Tetratricopeptide repeat.
       0.752
Hoch_6782
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mxa:MXAN_4144 response regulator FrzZ.
       0.701
Hoch_6780
KEGG: mxa:MXAN_5688 response regulator.
       0.544
Hoch_6781
PFAM: response regulator receiver; type IV pilus assembly PilZ; SMART: response regulator receiver; KEGG: afw:Anae109_4350 response regulator receiver modulated PilZ sensor protein.
       0.544
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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