STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_00865Pre-rRNA-processing protein PNO1. (264 aa)    
Predicted Functional Partners:
PAAG_01540
Bystin.
   
 0.999
PAAG_04204
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.999
PAAG_00456
Low-temperature viability protein ltv1.
   
 0.998
PAAG_02415
Serine/threonine-protein kinase RIO2.
   
 0.998
PAAG_01433
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.996
PAAG_06235
Ribosome biogenesis protein TSR1.
   
 0.996
PAAG_08881
Periodic tryptophan protein.
   
 
 0.996
PAAG_03828
40S ribosomal protein S9.
   
 0.995
PAAG_02634
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.993
PAAG_07182
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.992
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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