STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_05419rRNA 2'-O-methyltransferase fibrillarin. (318 aa)    
Predicted Functional Partners:
PAAG_00754
Ribosomal RNA-processing protein.
   
 0.999
PAAG_00775
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
PAAG_05498
Nucleolar protein NOP58.
   
 0.999
PAAG_07395
Nucleolar protein NOP56.
   
 0.999
PAAG_08927
U3 small nucleolar RNA-associated protein 22.
   
 0.998
PAAG_07378-2
Centromere/microtubule-binding protein cbf5.
   
 
 0.997
PAAG_02611
Utp12 domain-containing protein.
   
 0.997
PAAG_03304
WD domain-containing protein.
   
 0.997
PAAG_03367
U3 small nucleolar RNA-associated protein.
   
 0.997
PAAG_04640
U3 small nucleolar RNA-associated protein.
   
 0.997
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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