STRINGSTRING
Slin_0011 protein (Spirosoma linguale) - STRING interaction network
"Slin_0011" - Beta-lactamase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0011Beta-lactamase (427 aa)    
Predicted Functional Partners:
Slin_2198
Beta-lactamase (543 aa)
   
          0.777
Slin_4638
Beta-lactamase (390 aa)
   
          0.773
Slin_2207
Beta-lactamase (404 aa)
   
          0.770
Slin_5564
Beta-lactamase (693 aa)
   
          0.759
Slin_4637
Beta-lactamase (491 aa)
   
          0.737
Slin_0010
Isochorismatase hydrolase (213 aa)
   
   
  0.693
Slin_0012
Acetyltransferase (195 aa)
              0.659
Slin_0013
Muconate lactonizing mandelate racemase protein (366 aa)
              0.659
Slin_0459
Hypothetical protein (390 aa)
          0.570
Slin_0923
Hypothetical protein (418 aa)
          0.563
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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