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Slin_0013 protein (Spirosoma linguale) - STRING interaction network
"Slin_0013" - Muconate lactonizing mandelate racemase protein in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0013Muconate lactonizing mandelate racemase protein (366 aa)    
Predicted Functional Partners:
Slin_0012
Acetyltransferase (195 aa)
              0.856
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.681
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
   
   
  0.667
Slin_0011
Beta-lactamase (427 aa)
              0.659
Slin_0014
Amidohydrolase 2 (374 aa)
              0.634
Slin_2020
Muconate lactonizing mandelate racemase protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) (366 aa)
   
          0.583
Slin_0016
Hypothetical protein (69 aa)
              0.576
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (159 aa)
              0.576
Slin_5194
Beta-lactamase (323 aa)
 
          0.552
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) (274 aa)
 
   
  0.539
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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