STRINGSTRING
Slin_0042 protein (Spirosoma linguale) - STRING interaction network
"Slin_0042" - Metallophosphoesterase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0042Metallophosphoesterase (774 aa)    
Predicted Functional Partners:
Slin_0043
Hypothetical protein (114 aa)
              0.604
Slin_3166
Hypothetical protein (378 aa)
   
          0.531
Slin_2452
Hypothetical protein (649 aa)
   
          0.515
Slin_1225
Hypothetical protein (801 aa)
   
          0.512
Slin_4317
Hypothetical protein (620 aa)
   
          0.510
Slin_3459
Spore coat protein CotH (545 aa)
   
          0.508
Slin_4495
Hypothetical protein (489 aa)
   
          0.488
Slin_6007
Endonuclease/exonuclease/phosphatase (1015 aa)
   
          0.484
Slin_5344
Hydroxymethylbutenyl pyrophosphate reductase (412 aa)
   
          0.463
Slin_4277
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (488 aa)
   
          0.448
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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