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Slin_0052 protein (Spirosoma linguale) - STRING interaction network
"Slin_0052" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0052Hypothetical protein (82 aa)    
Predicted Functional Partners:
Slin_0051
Hypothetical protein (151 aa)
 
          0.967
Slin_1011
Hypothetical protein (153 aa)
   
          0.777
Slin_2880
Hypothetical protein (537 aa)
   
          0.514
Slin_5616
Hypothetical protein (451 aa)
   
          0.508
Slin_0050
Hypothetical protein (164 aa)
              0.493
Slin_5505
RND family efflux transporter MFP subunit (375 aa)
   
          0.476
Slin_0846
Metallophosphoesterase (371 aa)
   
          0.455
Slin_4014
PilT protein domain-containing protein (137 aa)
   
          0.409
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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