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Slin_0160 protein (Spirosoma linguale) - STRING interaction network
"Slin_0160" - UbiA prenyltransferase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0160UbiA prenyltransferase (291 aa)    
Predicted Functional Partners:
Slin_0159
TatD-related deoxyribonuclease (310 aa)
 
          0.933
Slin_3006
Trans-hexaprenyltranstransferase (324 aa)
   
 
  0.896
Slin_0084
3-dehydroquinate synthase (387 aa)
 
   
  0.873
Slin_0082
Type I phosphodiesterase/nucleotide pyrophosphatase (462 aa)
 
        0.862
Slin_0156
Hypothetical protein (224 aa)
 
          0.860
Slin_0083
Hypothetical protein (407 aa)
 
          0.860
atpD
ATP synthase F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (508 aa)
   
  0.824
atpA
ATP synthase F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (524 aa)
   
 
  0.821
Slin_3485
UbiA prenyltransferase (291 aa)
         
    0.800
Slin_5063
D-lactate dehydrogenase (1009 aa)
       
  0.777
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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