STRINGSTRING
Slin_0192 protein (Spirosoma linguale) - STRING interaction network
"Slin_0192" - Arginine deiminase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0192Arginine deiminase (501 aa)    
Predicted Functional Partners:
Slin_0407
Argininosuccinate synthase (400 aa)
         
  0.910
argH
Argininosuccinate lyase (445 aa)
         
  0.905
Slin_0306
Peptidase M20 (360 aa)
       
  0.901
Slin_5527
Orn/DAP/Arg decarboxylase 2 (494 aa)
       
    0.802
Slin_1156
Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein (320 aa)
   
   
  0.707
Slin_0193
Hypothetical protein (309 aa)
 
        0.650
Slin_4920
Hypothetical protein (506 aa)
   
          0.533
Slin_3039
Hypothetical protein (534 aa)
   
          0.527
Slin_6432
RagB/SusD domain-containing protein (542 aa)
   
          0.525
Slin_0191
LytTR family transcriptional regulator (234 aa)
              0.515
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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