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Slin_0214 protein (Spirosoma linguale) - STRING interaction network
"Slin_0214" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0214Hypothetical protein (389 aa)    
Predicted Functional Partners:
Slin_0213
Polysaccharide deacetylase (218 aa)
 
          0.955
Slin_0212
Family 2 glycosyl transferase (331 aa)
 
          0.707
Slin_0215
Type 12 methyltransferase (233 aa)
              0.646
Slin_6454
Hypothetical protein (231 aa)
   
          0.609
Slin_2129
Peptidase C10 streptopain (405 aa)
   
          0.600
Slin_3121
TonB-dependent siderophore receptor (809 aa)
   
          0.594
Slin_4282
Hypothetical protein (432 aa)
   
          0.583
Slin_0813
Hypothetical protein (240 aa)
   
          0.553
Slin_1383
Hypothetical protein (487 aa)
   
          0.533
Slin_4534
TonB-dependent receptor (779 aa)
   
          0.530
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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