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Slin_0218 protein (Spirosoma linguale) - STRING interaction network
"Slin_0218" - Homoserine O-acetyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0218Homoserine O-acetyltransferase (359 aa)    
Predicted Functional Partners:
Slin_0217
O-acetylhomoserine/O-acetylserine sulfhydrylase (437 aa)
 
 
  0.989
Slin_4514
Aspartate kinase (818 aa)
 
 
  0.978
Slin_3333
Cystathionine gamma-synthase (393 aa)
 
 
  0.951
Slin_1506
Cystathionine gamma-synthase (373 aa)
   
 
  0.944
Slin_0219
Hypothetical protein (197 aa)
              0.859
Slin_4250
Methionine synthase (1261 aa)
         
  0.682
Slin_5380
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate (180 aa)
     
   
  0.648
Slin_0220
Hypothetical protein (242 aa)
              0.634
Slin_1699
Methionine gamma-lyase (402 aa)
 
   
  0.617
Slin_2051
Sulfite reductase (720 aa)
   
   
  0.546
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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