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Slin_0225 protein (Spirosoma linguale) - STRING interaction network
"Slin_0225" - Glucosamine/galactosamine-6-phosphate isomerase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0225Glucosamine/galactosamine-6-phosphate isomerase (243 aa)    
Predicted Functional Partners:
Slin_6212
N-acetylglucosamine-6-phosphate deacetylase (398 aa)
 
 
  0.851
Slin_2932
N-acetylglucosamine-6-phosphate deacetylase (389 aa)
 
 
  0.821
Slin_0224
Xanthine/uracil/vitamin C permease (436 aa)
              0.659
Slin_5156
ROK family protein (304 aa)
 
 
 
  0.639
Slin_0226
Phosphodiesterase/alkaline phosphatase D (471 aa)
              0.632
Slin_6585
ROK family protein (278 aa)
 
 
 
  0.606
Slin_3027
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (221 aa)
   
 
  0.585
Slin_0348
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (219 aa)
   
 
  0.585
Slin_2646
ROK family protein (298 aa)
 
 
 
  0.569
Slin_2562
ROK family protein (314 aa)
 
 
 
  0.550
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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