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Slin_0241 protein (Spirosoma linguale) - STRING interaction network
"Slin_0241" - Cobyrinic acid ac-diamide synthase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0241Cobyrinic acid ac-diamide synthase (300 aa)    
Predicted Functional Partners:
Slin_0242
parB-like partition protein (304 aa)
 
  0.981
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (469 aa)
 
 
  0.746
Slin_2436
Tyrosine recombinase XerD (305 aa)
 
   
  0.718
Slin_3066
Integrase family protein (390 aa)
 
   
  0.716
Slin_0098
Integrase family protein (298 aa)
 
   
  0.715
Slin_0240
Radical SAM protein (340 aa)
              0.679
Slin_5855
Cell division protein FtsK (856 aa)
 
     
  0.633
Slin_0243
Hypothetical protein (287 aa)
              0.626
Slin_0239
XisI protein (115 aa)
              0.590
Slin_0238
XisH protein (138 aa)
              0.590
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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