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Slin_0243 protein (Spirosoma linguale) - STRING interaction network
"Slin_0243" - Hypothetical protein in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0243Hypothetical protein (287 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (244 aa)
 
          0.790
Slin_0245
Signal peptidase I (390 aa)
 
          0.765
Slin_1306
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (103 aa)
   
          0.759
Slin_5378
TonB family protein (156 aa)
   
          0.744
Slin_0992
Surface antigen (D15) (875 aa)
   
          0.744
Slin_1307
Outer membrane assembly lipoprotein YfiO (299 aa)
   
          0.738
Slin_0242
parB-like partition protein (304 aa)
              0.731
Slin_3158
Hypothetical protein (857 aa)
   
          0.718
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (230 aa)
   
          0.717
Slin_1369
WbqC-like family protein (217 aa)
 
          0.713
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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