STRINGSTRING
Slin_0255 protein (Spirosoma linguale) - STRING interaction network
"Slin_0255" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0255Hypothetical protein (165 aa)    
Predicted Functional Partners:
Slin_1327
Hypothetical protein (223 aa)
   
          0.730
Slin_0724
Polysaccharide biosynthesis protein (448 aa)
 
          0.726
Slin_0414
Hypothetical protein (203 aa)
   
          0.692
Slin_1424
RagB/SusD domain-containing protein (604 aa)
   
          0.685
Slin_6341
Hypothetical protein (245 aa)
   
          0.635
Slin_4935
Polysaccharide biosynthesis protein (442 aa)
 
          0.592
Slin_5396
Hypothetical protein (190 aa)
   
          0.589
Slin_5071
Hypothetical protein (190 aa)
   
          0.588
Slin_1596
Hypothetical protein (194 aa)
   
     
  0.583
Slin_0254
Fructose-bisphosphate aldolase (359 aa)
              0.583
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (6%) [HD]