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Slin_0258 protein (Spirosoma linguale) - STRING interaction network
"Slin_0258" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0258Hypothetical protein (210 aa)    
Predicted Functional Partners:
Slin_3290
XRE family transcriptional regulator (67 aa)
   
          0.695
Slin_6044
Peptidase M1 membrane alanine aminopeptidase (649 aa)
   
          0.682
Slin_0259
Crp/Fnr family transcriptional regulator (179 aa)
              0.657
Slin_4268
Hypothetical protein (313 aa)
   
          0.592
Slin_2631
Beta-galactosidase (701 aa)
   
          0.576
Slin_2869
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (308 aa)
   
          0.551
Slin_3972
Hypothetical protein (595 aa)
   
          0.543
Slin_0719
Group 1 glycosyl transferase (401 aa)
   
          0.497
Slin_2201
Hypothetical protein (261 aa)
   
          0.486
Slin_2023
N-acetyltransferase GCN5 (177 aa)
   
          0.476
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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