STRINGSTRING
Slin_0271 protein (Spirosoma linguale) - STRING interaction network
"Slin_0271" - N-acylglucosamine 2-epimerase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0271N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) (402 aa)    
Predicted Functional Partners:
Slin_3032
Mannan endo-1,4-beta-mannosidase (385 aa)
 
     
  0.867
Slin_6532
Mannan endo-1,4-beta-mannosidase (584 aa)
 
     
  0.841
Slin_0768
Glycosidase PH1107-like protein (357 aa)
 
     
  0.725
Slin_1163
Glycosidase PH1107-like protein (496 aa)
 
     
  0.663
Slin_0272
Hypothetical protein (86 aa)
              0.587
Slin_1717
Hypothetical protein (642 aa)
 
          0.563
Slin_1080
Hypothetical protein (652 aa)
 
          0.560
Slin_2622
Hypothetical protein (521 aa)
 
          0.552
Slin_3919
Glycosidase PH1107-like protein (364 aa)
 
     
  0.541
Slin_3338
Glycoside hydrolase family protein (382 aa)
 
          0.523
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]