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Slin_0296 protein (Spirosoma linguale) - STRING interaction network
"Slin_0296" - Rhodanese in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0296Rhodanese (97 aa)    
Predicted Functional Partners:
Slin_4680
Cysteine desulfurase (372 aa)
   
  0.949
Slin_4051
Cysteine desulfurase (380 aa)
   
  0.949
Slin_1497
Cysteine desulfurase (389 aa)
   
  0.949
Slin_2684
Rhodanese (101 aa)
   
          0.712
Slin_0295
Hypothetical protein (621 aa)
              0.637
Slin_0294
Protein PASTA domain-containing protein (258 aa)
              0.604
Slin_1863
Redoxin (409 aa)
 
 
  0.531
Slin_1597
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (650 aa)
 
 
  0.507
Slin_3463
UBA/THIF-type NAD/FAD binding protein (379 aa)
 
 
0.497
Slin_1503
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (437 aa)
 
 
  0.495
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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