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Slin_0301 protein (Spirosoma linguale) - STRING interaction network
"Slin_0301" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0301Hypothetical protein (448 aa)    
Predicted Functional Partners:
Slin_0300
Hypothetical protein (263 aa)
              0.840
Slin_4879
Hypothetical protein (170 aa)
   
          0.757
Slin_0467
Hypothetical protein (261 aa)
   
          0.698
Slin_3800
Hypothetical protein (515 aa)
   
          0.671
Slin_5318
Hypothetical protein (585 aa)
   
          0.659
Slin_0716
Hypothetical protein (338 aa)
   
          0.655
Slin_5875
Hypothetical protein (134 aa)
   
          0.633
Slin_1361
Gliding motility-associated protein GldC (118 aa)
   
          0.632
Slin_6535
TonB-dependent receptor (694 aa)
   
          0.628
Slin_1086
Peptidase M1 membrane alanine aminopeptidase (552 aa)
   
          0.624
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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