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Slin_0311 protein (Spirosoma linguale) - STRING interaction network
"Slin_0311" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0311Hypothetical protein (108 aa)    
Predicted Functional Partners:
Slin_0310
Short-chain dehydrogenase/reductase SDR (261 aa)
 
          0.950
Slin_0412
Amidohydrolase 2 (274 aa)
 
          0.849
Slin_2512
Hypothetical protein (343 aa)
   
          0.643
Slin_1260
Alcohol dehydrogenase zinc-binding domain-containing protein (339 aa)
 
          0.639
Slin_0413
5-carboxymethyl-2-hydroxymuconatedelta- isomerase (284 aa)
 
          0.559
Slin_0415
Short-chain dehydrogenase/reductase SDR (257 aa)
 
          0.557
Slin_4785
Altronate dehydratase (551 aa)
 
          0.532
Slin_0416
Altronate dehydratase (582 aa)
 
          0.504
Slin_1494
L-fucose transporter (414 aa)
 
     
  0.504
Slin_1259
L-fucose transporter (417 aa)
 
     
  0.501
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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