STRINGSTRING
Slin_0324 protein (Spirosoma linguale) - STRING interaction network
"Slin_0324" - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0324D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (311 aa)    
Predicted Functional Partners:
Slin_1073
Class V aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (363 aa)
 
 
  0.971
Slin_2434
Class V aminotransferase (338 aa)
 
 
  0.968
Slin_2908
Phosphoglycerate mutase (219 aa)
 
 
  0.924
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (525 aa)
   
 
  0.914
Slin_1926
Glycerate kinase (371 aa)
         
  0.905
Slin_2483
Histone deacetylase (300 aa)
     
  0.861
Slin_1074
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (634 aa)
   
   
 
0.829
Slin_6268
Nitric oxide synthase NOS (1524 aa)
     
    0.809
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (546 aa)
 
   
  0.729
Slin_5853
Uracil phosphoribosyltransferase (215 aa)
     
  0.728
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (15%) [HD]