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Slin_0326 protein (Spirosoma linguale) - STRING interaction network
"Slin_0326" - Mg-chelatase subunit ChlI-like protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0326Mg-chelatase subunit ChlI-like protein (510 aa)    
Predicted Functional Partners:
Slin_6103
Protoporphyrinogen oxidase (454 aa)
   
 
  0.924
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (353 aa)
   
 
  0.915
Slin_0340
Hypothetical protein (367 aa)
 
        0.863
Slin_0325
Cell surface receptor IPT/TIG domain-containing protein (597 aa)
              0.527
Slin_3235
Hypothetical protein (154 aa)
   
          0.522
Slin_0742
LmbE family protein (882 aa)
   
          0.512
Slin_6028
Phosphoesterase RecJ domain-containing protein (343 aa)
   
          0.498
Slin_1183
Hypothetical protein (236 aa)
   
          0.466
Slin_3072
anti-sigma-K factor RskA (274 aa)
   
          0.440
menA
1,4-dihydroxy-2-naphthoateoctaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) (297 aa)
     
        0.437
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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