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Slin_0335 protein (Spirosoma linguale) - STRING interaction network
"Slin_0335" - PKD domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0335PKD domain-containing protein (984 aa)    
Predicted Functional Partners:
Slin_3604
DoxX family protein (129 aa)
         
    0.900
Slin_1696
Sulfate adenylyltransferase (300 aa)
         
    0.900
Slin_1693
Sulfate adenylyltransferase large subunit; May be the GTPase, regulating ATP sulfurylase activity (416 aa)
         
    0.900
Slin_4030
PKD domain-containing protein (1182 aa)
 
   
 
0.830
Slin_0334
Xylose isomerase (318 aa)
              0.829
Slin_3440
PKD domain-containing protein (1143 aa)
 
   
 
0.822
Slin_4672
PKD domain-containing protein (941 aa)
 
   
 
0.812
Slin_2735
Oxidoreductase molybdopterin binding protein (415 aa)
       
    0.811
Slin_2734
Cytochrome C class I (200 aa)
       
    0.808
Slin_5485
Cytochrome C class I (561 aa)
   
          0.766
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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