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Slin_0340 protein (Spirosoma linguale) - STRING interaction network
"Slin_0340" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0340Hypothetical protein (367 aa)    
Predicted Functional Partners:
Slin_0326
Mg-chelatase subunit ChlI-like protein (510 aa)
 
        0.863
Slin_3235
Hypothetical protein (154 aa)
   
          0.700
Slin_0742
LmbE family protein (882 aa)
   
          0.664
Slin_3072
anti-sigma-K factor RskA (274 aa)
 
          0.625
Slin_1183
Hypothetical protein (236 aa)
   
          0.610
Slin_4465
Hypothetical protein (199 aa)
   
          0.604
Slin_0089
Hypothetical protein (223 aa)
   
          0.569
Slin_0339
Hypothetical protein (230 aa)
              0.568
Slin_0341
Hypothetical protein (192 aa)
              0.563
Slin_3613
Hypothetical protein (175 aa)
   
          0.544
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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