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pyrB protein (Spirosoma linguale) - STRING interaction network
"pyrB" - Aspartate carbamoyltransferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBAspartate carbamoyltransferase (307 aa)    
Predicted Functional Partners:
Slin_5385
Amidohydrolase (445 aa)
  0.999
carA
Carbamoyl-phosphate synthase small subunit (367 aa)
  0.999
Slin_6239
Carbamoyl-phosphate synthase large subunit (958 aa)
  0.999
Slin_6624
Dihydroorotase (434 aa)
  0.999
Slin_3159
Uracil phosphoribosyltransferase (179 aa)
 
 
  0.978
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (428 aa)
 
 
  0.961
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (349 aa)
 
   
  0.957
Slin_0407
Argininosuccinate synthase (400 aa)
   
 
  0.950
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
 
   
  0.947
Slin_6182
Phosphoribosyltransferase (170 aa)
 
 
  0.941
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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