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Slin_0354 protein (Spirosoma linguale) - STRING interaction network
"Slin_0354" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0354Hypothetical protein (725 aa)    
Predicted Functional Partners:
Slin_0355
Polysaccharide deacetylase (265 aa)
 
          0.889
Slin_2597
UTP--glucose-1-phosphate uridylyltransferase (1119 aa)
   
          0.751
Slin_4692
Hypothetical protein (721 aa)
   
          0.613
Slin_5622
Acetyl xylan esterase (407 aa)
   
          0.611
Slin_1913
Hypothetical protein (215 aa)
   
          0.603
Slin_3338
Glycoside hydrolase family protein (382 aa)
   
          0.593
Slin_3366
Hypothetical protein (284 aa)
   
          0.590
Slin_1897
Hypothetical protein (340 aa)
   
          0.577
Slin_1645
Hypothetical protein (300 aa)
   
          0.523
Slin_2836
Hypothetical protein (469 aa)
   
          0.498
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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