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Slin_0358 protein (Spirosoma linguale) - STRING interaction network
"Slin_0358" - Coagulation factor 5/8 type domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0358Coagulation factor 5/8 type domain-containing protein (1114 aa)    
Predicted Functional Partners:
Slin_1801
RhaT l-rhamnose-proton symport 2 (345 aa)
 
          0.774
Slin_1804
Xylose isomerase (424 aa)
 
          0.636
Slin_3438
Late embryogenesis abundant protein 2 (304 aa)
   
          0.587
Slin_1802
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase (701 aa)
 
          0.577
Slin_1871
Hypothetical protein (794 aa)
   
          0.569
Slin_1805
Sugar (pentulose and hexulose) kinase-like protein (474 aa)
   
          0.566
Slin_6152
Hypothetical protein (418 aa)
   
          0.549
Slin_0437
Oxidoreductase domain-containing protein (441 aa)
   
          0.532
Slin_4046
Phosphoadenosine phosphosulfate reductase (368 aa)
   
          0.524
Slin_1913
Hypothetical protein (215 aa)
   
          0.520
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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